FSL experts,
I am trying to use fsl_motion_outliers on an event-related fMRI dataset using the following command:
fsl_motion_outliers -i ${a}_MB_run1motion.nii.gz -o ${a}_MB_run1motion_confound -p ${a}_run1_dvars.png -s ${a}_run1_dvars.txt --dvars \
--nomoco
I get the plot and values for DVARS, but I don't get the actual output file created. Thoughts?
Thanks,
Karen
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