Hi Xinman,
What version of FSL are you using? Did the installation
(fslinstaller.py) complete successfully?
What does the output of the following command give you?
which imglob
Cheers,
Paul
On 07/05/2019, Xinman Liu <[log in to unmask]> wrote:
> Hello, FSL experts,
> I have been stuck in this problem for a few weeks. Before I upgraded FSL,
> all the steps worked well on FA datasets, but after upgrading, I have
> trouble finishing the very first step. So I deleted VMware workstation and
> FSL and installed them all over again, but it didn't work either.
> The terminal always showed:
> [fsluser@localhost mytbss]$ tbss_1_preproc *.nii.gz
> Now running "slicesdir" to generate report of all input images
> -e <thr> : use the specified threshold for edges (if >0 use this
> proportion of max-min, if <0, use the absolute value)
> -S : output every second axial slice rather than just 9 ortho
> slices
> [fsluser@localhost mytbss]$ tbss_2_reg -T
> Task file (.commands) does not exist
> [fsluser@localhost mytbss]$
> Could you please give me some suggestions? What should I do with it? Any
> help would be appreciated.
> Best regards,
> Xinman
>
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