Hi all.
I am trying to install locally and run ARIA 2.3 with ccpnmr analysis 2.4.2. The system is a mac OS X 10.11.6. ARIA installation seems OK according to the check.py test and all the necessary modules appear as correctly installed. ARIA graphics interface starts perfectly from analysis and I can create an ARIA project. However, when I try to run the calculation the program returns the following messages and stops with error:
ARIA Version 2.3.2. Authors: Benjamin Bardiaux, Michael Habeck, Jens Linge,
Therese Malliavin, Sean O'Donoghue, Wolfgang Rieping, and Michael Nilges.
If you use this software, please quote the following reference(s):
Rieping W., Habeck M., Bardiaux B., Bernard A., Malliavin T.E.,
Nilges M.(2007) ARIA2: automated NOE assignment and data integration in NMR
structure calculation. Bioinformatics 23:381-382
Loading project "AII_aria_2019.xml"...
MESSAGE [Project]: Temporary directory has been set to /Users/conejero/ccpnmr/
AII_2019_restrains/aria_temp.tmpXU0bPK1557314416
MESSAGE [Project]: List of available machines is empty. Running calculations on
localhost "conejero.ugr.es", assuming 1 CPU. Using /
Applications/ccpnmr/cns_solve_1.21/mac-intel-darwin/bin/cns
as structure engine.
MESSAGE [Project]: Checking host list ...
MESSAGE [Job manager]: Command "csh -f" ... ok.
MESSAGE [Project]: Cache is disabled.
Model read finished. Duration 2.53317499161
Model validity check skipped
MESSAGE [Project]: ------------ Reading data from CCPN data model ------------
MESSAGE [Project]: Opening CCPN data model "/Users/conejero/ccpnmr/AII_2019_rest
rains"...
Warning: refData has been changed from
"/Applications/ccpnmr/ccpnmr2.4/data"
to
"/Applications/ccpnmr/CCPNMR2.4/data"
MESSAGE [Project]: CCPN data model opened.
MESSAGE [Project]: Retrieving molecular system "MS1", chain code(s) "A"...
MESSAGE [Project]: Retrieving Constraint List "1|2" of type "ambiguous" ...
MESSAGE [Project]: Retrieving Constraint List "1|1" of type "unambiguous" ...
MESSAGE [Project]: Retrieving Constraint List "1|3" of type "dihedrals" ...
MESSAGE [Project]: Retrieving peak list "(project=AII_2018, experiment=3,
data_source=1, serial=1)", shift list "1" ...
Traceback (most recent call last):
File "/Applications/ccpnmr/aria2.3/aria2.py", line 903, in <module>
verbose_level, use_condor=condor)
File "/Applications/ccpnmr/aria2.3/aria2.py", line 811, in run_aria
project.load_and_preprocess_data()
File "/Applications/ccpnmr/aria2.3/src/py/aria/Project.py", line 1468, in load_and_preprocess_data
self.read_data()
File "/Applications/ccpnmr/aria2.3/src/py/aria/Project.py", line 1198, in read_data
self.read_ccpn_data()
File "/Applications/ccpnmr/aria2.3/src/py/aria/Project.py", line 849, in read_ccpn_data
cType, self.molecule)
File "/Applications/ccpnmr/aria2.3/src/py/aria/importFromCcpn.py", line 1272, in getAriaDistanceRestraintsList
if distConstr.details <> '' and distConstr.details.find('Original Id') >= 0:
AttributeError: 'NoneType' object has no attribute 'find'
Any idea of what could be the problem?
Many thanks in advance.
Francisco
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