Hi,
First, please look at *_data.star and *_model.star and see if
it contains 'nan's.
I heard similar issues before (and today
https://github.com/3dem/relion/issues/473)
but could not reproduce them locally. Most cases resolved spontaneously
when the
program was executed on other machines or they run one more round of Class2D.
If you could identify a small subset of your data that reproducibly causes
the
issue and share us off-list, I will investigate further.
Best regards,
Takanori Nakane
> Hi,
>
> Relion 3D classification gets stuck in Maximization and runs out of wall
tim
> e. After restarting from last iteration it gets stuck after copying
particle
> s to scratch disk, so "Estimating accuracies in the orientational
assignmen
> t … “ is not written yet in log. Restarting from one iteration earlier thi
> ngs get stuck after the Maximisation again. Where should I be looking to
sol
> ve this problem?
>
> Best,
>
> Wim Hagen
> EMBL Heidelberg
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