Hi guys,
I tested the PR 137 in the VM. I added a commit. Merged to master and tagged.
Update_VM fails ...
[ 1%] Creating directories for 'NIFTYREG'
[ 2%] Performing download step (git clone) for 'NIFTYREG'
Cloning into 'NIFTYREG'...
warning: remote HEAD refers to nonexistent ref, unable to checkout.
fatal: reference is not a tree: 22f24db1113973507689aeabbc3f17ddeca1d7f6
CMake Error at /home/sirfuser/devel/buildVM/builds/NIFTYREG/tmp/NIFTYREG-gitclone.cmake:75 (message):
Failed to checkout tag: '22f24db1113973507689aeabbc3f17ddeca1d7f6'
Checking the SuperBuild tag is v2.0.0 and SIRF_TAG is v2.0.0
Apparently NIFTYREG_TAG is wrong?
Edo
-----Original Message-----
From: CCP-PETMR Developers list <[log in to unmask]> On Behalf Of Edoardo Pasca - UKRI STFC
Sent: 17 May 2019 22:02
To: [log in to unmask]
Subject: Re: VM 2.0.0
sure.
The only thing I don't have access to is Zenodo.
Edo
________________________________
From: CCP-PETMR Developers list <[log in to unmask]> on behalf of Thielemans, Kris <[log in to unmask]>
Sent: Friday, May 17, 2019 4:47:42 PM
To: [log in to unmask]
Subject: Re: VM 2.0.0
Hi
I think the best thing to do is now that Edo run this on his VM, re-zeroes and re-exports, and then upload later. Amazingly, zenodo is down, so we cannot upload there anyway...
So, release on Monday. Edo, can you take care of this then? (website, email with suitably enthusing message to all lists, rest of the checklist anyway). I can help if need be.
Kris
> -----Original Message-----
> From: CCP-PETMR Developers list <[log in to unmask]> On
> Behalf Of Brown, Richard
> Sent: 17 May 2019 16:41
> To: [log in to unmask]
> Subject: Re: VM 2.0.0
>
> we fixed Evgueni's error with "sudo pip uninstall pyder-kernels".
>
> We're not overly sure what the problem was about, nor why this fixed
> it...
>
> I'll update the VM script.
>
> Rich
>
>
> > On 17 May 2019, at 16:17, Evgueni Ovtchinnikov - UKRI STFC
> <[log in to unmask]> wrote:
> >
> > sorry it appears i replied to edoardo only...
> >
> >
> > ________________________________
> > From: Ovtchinnikov, Evgueni (STFC,RAL,SC)
> > Sent: Friday, May 17, 2019 3:36 PM
> > To: Pasca, Edoardo (STFC,RAL,SC)
> > Subject: Re: VM 2.0.0
> >
> >
> > Everything seems ok save for this error message when starting Spyder
> > (which
> seems to work fine regardless):
> >
> > File
> > "/usr/local/lib/python2.7/dist-packages/spyder/otherplugins.py",
> > line 79,
> in _import_plugin
> > module = _import_module_from_path(module_name, plugin_path) File
> > "/usr/local/lib/python2.7/dist-packages/spyder/otherplugins.py",
> > line 101, in
> _import_module_from_path
> > info = imp.find_module(module_name, [plugin_path])
> > ImportError: No module named spyder_kernels-0.4.2.dist-info
> >
> > By the way, when I open a file in Spyder, 'Open file' window looks
> > different
> from previous VM (which I got from your OneDrive link) - have you
> installed different version of Spyder lately?
> >
> > ________________________________
> > From: CCP-PETMR Developers list <[log in to unmask]> on
> > behalf of Edoardo Pasca - UKRI STFC <[log in to unmask]>
> > Sent: Friday, May 17, 2019 12:20:29 PM
> > To: [log in to unmask]
> > Subject: VM 2.0.0
> >
> >
> > Hi there,
> >
> >
> >
> > If someone wants to try and comment on the VM with SIRF 2.0.0 it can
> > be downloaded from
> >
> > https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fedo
> > si
> >
> l.net%2Fstfc%2Fsirf%2FSIRF_2.0.0.ova&data=02%7C01%7Ck.thielemans%4
> >
> 0UCL.AC.UK%7C46b37bcde41c4d71a35c08d6dade2f7d%7C1faf88fea9984c5b93
> c921
> >
> 0a11d9a5c2%7C0%7C0%7C636937045151742495&sdata=pze2eLd6%2BX
> ML4qqjN8
> > oosDCC0MYS8T5GDtmlDFYRdN0%3D&reserved=0
> >
> >
> >
> > Edo
> >
> >
> >
> > --
> > Edoardo Pasca, PhD
> > Senior Visualisation Scientist
> > Scientific Computing Department, STFC Rutherford Appleton Laboratory
> > Fermi Avenue Chilton Didcot OX11 0QX
> > 0044 (0)1235 44 5660, R89 F16
> > :wq
> >
> >
> >
> > ________________________________
> >
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> 151742
> >
> 495&sdata=Jd%2BLGhPg5oUkXcpCDJVS3Onc1h4ptS6ClaX62Lpp6jQ%3D&a
> mp;res
> > erved=0
> >
> >
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