Dear Leonardo,
If you want an html report, then you need to either run via the GUI, or add the —report flag to the command line call.
Hope this helps,
Kind Regards
Matthew
--------------------------------
Dr Matthew Webster
FMRIB Centre
John Radcliffe Hospital
University of Oxford
> On 16 Jan 2019, at 02:24, Leonardo Tozzi <[log in to unmask]> wrote:
>
> Dear experts,
>
> I have a large number of subjects, who all performed the same GoNoGo task, with the same event onsets. I would like to analyse this dataset using MELODIC. From what I understand from your guide, in this situation I can use Tensor ICA and run a group analysis across all my subjects. From the components that are identified I would like to pick those who have a relationship with my task design. Then, I would perform double regression on these components. Does this procedure make sense?
> To run MELODIC, I generated a design matrix and some contrasts, based on the task onset times convolved with a canonical HRF. Then I made the following MELODIC call:
>
> melodic -i GNGfMRIlist.txt -o GNG_allsubs_MELODIC --Oall -a tica -v --Tdes=FirstLevelDesign/GoNoGo_design.mat --Tcon=FirstLevelDesign/GoNoGo_design.con
>
> However, after running MELODIC (which produces no errors), I don't see the output related to how the components fit my task design, nor the html report that I understand should be produced. Also, I would be very grateful if someone could point me to somewhere where I can find an explaination of all the output files of MELODIC. Is it possible that the output I am looking for could be one of these files?
> Also, I am running FSL 5.0.11, could this be a version problem?
>
> Thank you very much for your help.
> Yours faithfully,
>
> Leonardo Tozzi
>
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