Hi Matteo!
Hmm yep I'm pointing to the new version. I checked the dimensions of both avg_b0 images, they are both 3D and look fine in the viewer. Not sure what I'm missing, sorry!
mpinsk$ fslinfo avg_b0_pe0.nii.gz
data_type FLOAT32
dim1 140
dim2 140
dim3 100
dim4 1
datatype 16
pixdim1 1.500000
pixdim2 1.500000
pixdim3 1.500000
pixdim4 1.000000
cal_max 0.000000
cal_min 0.000000
file_type NIFTI-1+
mpinsk$ fslinfo avg_b0_pe1.nii.gz
data_type FLOAT32
dim1 140
dim2 140
dim3 100
dim4 1
datatype 16
pixdim1 1.500000
pixdim2 1.500000
pixdim3 1.500000
pixdim4 1.000000
cal_max 0.000000
cal_min 0.000000
file_type NIFTI-1+
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