Hi,
You need to run a separate script, which is described in the wiki - see https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FIRST/UserGuide#Viewing_results
All the best,
Mark
> On 26 Mar 2019, at 01:56, Nathaniel Lum <[log in to unmask]> wrote:
>
> Hi experts,
>
> I have results from FSL shape analysis with a statistical map generated.
>
> Is there a way to display these results in 3D? (example: http://tiny.cc/3dvisualization or http://tiny.cc/haig4y) instead of the orthogonal view in FSLeyes.
> I will need to overlay the statistical map I have generated onto an MNI image of the subcortical structures (thalamus, caudate)
>
> I have tried the 3D view in FSLeyes but have not managed to create a good 3D visualization.
>
> If it is not possible within FSL, could someone be so kind as to point me to another program that you recommend? Thank you!
>
>
>
> Best Regards,
> Nathaniel Lum
>
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