Dear Animesh,
I cannot help without full log that also includes the error message. Anyway, I suspect that writing of some files wasn't successful and you could simply repeat processing of the data set co03.
Best,
Christian
On Thu, 28 Mar 2019 10:39:12 -0600, Animesh Kumar Paul <[log in to unmask]> wrote:
>Dear Sir,
>
>I am trying to use CAT12 for segmentation for 100 patients.
>
>But it gives the below error:
>
>Print 'Graphics' figure to:
> /home/GA/report/catreport_co03.pdf
>28-Mar-2019 10:00:37 - Failed 'CAT12: Segmentation'
>Error using cat_io_FreeSurfer>read_curv (line 673)
>Curvature file "/home/GA/surf/lh.defects.co03" does not exist!
>
>In file "/media/spm12/toolbox/cat12/cat_io_FreeSurfer.m" (v1286), function
>"read_curv" at line 673.
>In file "/media/spm12/toolbox/cat12/cat_io_FreeSurfer.m" (v1286), function
>"cat_io_FreeSurfer" at line 95.
>In file "/media/spm12/toolbox/cat12/cat_surf_createCS.m" (v1425), function
>"cat_surf_createCS" at line 630.
>In file "/media/spm12/toolbox/cat12/cat_main.m" (v1425), function
>"cat_main" at line 645.
>In file "/media/spm12/toolbox/cat12/cat_run_job.m" (v1414), function
>"cat_run_job" at line 748.
>In file "/media/spm12/toolbox/cat12_old/cat_run_newcatch.m" (???), function
>"cat_run_newcatch" at line 15.
>In file "/media/spm12/toolbox/cat12/cat_run.m" (v1439), function "run_job"
>at line 720.
>In file "/media/spm12/toolbox/cat12/cat_run.m" (v1439), function "cat_run"
>at line 434.
>
>The following modules did not run:
>Failed: CAT12: Segmentation
>
>
>Can you please help me how can I fix it?
>
>Thanks
>
>Animesh Kumar Paul
>ᐧ
>ᐧ
>
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