Dear all,
1) Is there a way to stop relion-3.0 from exiting the GUI after
600 seconds? Sometimes that might be helpful.
2) I got access to a workstation with 128 CPUs. However when
specifying more than 32 in the "Number of MPI proc" tab I receive an
error message (You're submitting a local job with 64 parallel MPI
processes. That's more than allowed by the RELION_ERROR_LOCAL_MOI
environment vartiable) even when I set "RELION_MPI_MAX=128" and
"RELION_THREAD_MAX=4" prior to starting relion-3.0. I also tried setting
"RELION_ERROR_LOCAL_MOI=128".
What can I do to make use of the entire capacity of the workstation e.g.
for running Class3D without alignment? What would be the best
combination of parameters (without using GUIs)? Did I misunderstand
something?
the last one in the list of cat /proc/cpuinfo:
processor : 127
vendor_id : AuthenticAMD
cpu family : 23
model : 1
model name : AMD EPYC 7501 32-Core Processor
stepping : 2
microcode : 0x8001227
cpu MHz : 2000.000
cache size : 512 KB
physical id : 1
Thank you, bw Dieter
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Dieter Blaas,
Max F. Perutz Laboratories
Medical University of Vienna,
Inst. Med. Biochem., Vienna Biocenter (VBC),
Dr. Bohr Gasse 9/3,
A-1030 Vienna, Austria,
Tel: 0043 1 4277 61630,
Fax: 0043 1 4277 9616,
e-mail:[log in to unmask]
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