Dear Darin,
You do not necessarily need the same CUDA version for Gctf and relion. I
guess you could have 2 versions of CUDA installed, and link each program
to its corresponding version.
HTH,
Sjors
Darin Lory wrote:
> This is the error I'm getting for Gctf 1.06
>
> [darin.lory ~]$ /usr/local/bin/Gctf-v1.06_sm_30_cu8.0_x86_64
> /usr/local/bin/Gctf-v1.06_sm_30_cu8.0_x86_64: error while loading shared libraries: libcufft.so.8.0: cannot open shared object file: No such file or directory
>
> I compiled RELION 3.0 stable on RHEL 7.6 with CUDA 10 toolkit.
>
> [darin.lory ~]$ locate libcufft.so.8.0
> /apps/packages/eman2/lib/libcufft.so.8.0
> /apps/packages/eman2/lib/libcufft.so.8.0.61
> /apps/packages/eman2/pkgs/cudatoolkit-8.0-3/lib/libcufft.so.8.0
> /apps/packages/eman2/pkgs/cudatoolkit-8.0-3/lib/libcufft.so.8.0.61
> /apps/packages/imod/4.9.11/imod_4.9.11/qtlib/libcufft.so.8.0
> /apps/packages/imod/4.9.11/imod_4.9.11/qtlib/libcufft.so.8.0.61
>
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--
Sjors Scheres
MRC Laboratory of Molecular Biology
Francis Crick Avenue, Cambridge Biomedical Campus
Cambridge CB2 0QH, U.K.
tel: +44 (0)1223 267061
http://www2.mrc-lmb.cam.ac.uk/groups/scheres
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