Hi,
> ???? 1) Is there a way to stop relion-3.0 from exiting the GUI after
> 600 seconds? Sometimes that might be helpful.
relion --idle=999999
> ????? 2) I got access to a workstation with 128 CPUs. However when
> specifying more than 32 in the "Number of MPI proc" tab I receive an
> error message (You're submitting a local job with 64 parallel MPI
> processes. That's more than allowed by the RELION_ERROR_LOCAL_MOI
> environment vartiable) even when I set "RELION_MPI_MAX=128" and
> "RELION_THREAD_MAX=4" prior to starting relion-3.0. I also tried setting
> "RELION_ERROR_LOCAL_MOI=128".
RELION_ERROR_LOCAL_MPI=128, not RELION_ERROR_LOCAL_MOI.
Best regards,
Takanori Nakane
> What can I do to make use of the entire capacity of the workstation e.g.
> for running Class3D without alignment? What would be the best
> combination of parameters (without using GUIs)? Did I misunderstand
> something?
>
> the last one in the list of cat /proc/cpuinfo:
>
> processor??? : 127
> vendor_id??? : AuthenticAMD
> cpu family??? : 23
> model??? ??? : 1
> model name??? : AMD EPYC 7501 32-Core Processor
> stepping??? : 2
> microcode??? : 0x8001227
> cpu MHz??? ??? : 2000.000
> cache size??? : 512 KB
> physical id??? : 1
>
> Thank you, bw Dieter
>
> ------------------------------------------------------------------------
> Dieter Blaas,
> Max F. Perutz Laboratories
> Medical University of Vienna,
> Inst. Med. Biochem., Vienna Biocenter (VBC),
> Dr. Bohr Gasse 9/3,
> A-1030 Vienna, Austria,
> Tel: 0043 1 4277 61630,
> Fax: 0043 1 4277 9616,
> e-mail:[log in to unmask]
> ------------------------------------------------------------------------
>
> ########################################################################
>
> To unsubscribe from the CCPEM list, click the following link:
> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCPEM&A=1
>
########################################################################
To unsubscribe from the CCPEM list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCPEM&A=1
|