Dear Claudia,
I am currently in the finishing stages of a new release of eddy. Hopefully some of these old bugs will have been fixed in that, and you may be able to just run the new version successfully.
If not, and the beg still persists it is better we solve that within the new version.
Jesper
> On 22 Jan 2019, at 15:25, SUBSCRIBE FSL Claudia Lugo-Candelas <[log in to unmask]> wrote:
>
> Hi all
>
> We are getting the following error when running Eddy CUDA, it appears just after it finished making predictions for the scans. Any ideas on what could be happening? Thanks!
>
>
>
>
> Performing slice-to-volume registration
> Setting slice-to-volume order to 6
> Running Register
> Loading prediction maker
> Scan: 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31
> Evaluating prediction maker model
> Initial guess for hyperparameters: 1.18583
> 0.45000
> 1.31759
>
> cf = 6524.036424
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6524.036424
> p = 2.18583 0.45000 1.31759
> cf = 6523.178765
> p = 1.99323 0.49299 1.11607
> cf = 6521.354296
> p = 1.91606 0.46236 1.23204
> cf = 6521.354296
> p = 1.91606 0.46236 1.23204
> cf = 6520.535863
> p = 2.08852 0.46710 1.27007
> cf = 6520.535863
> p = 2.08852 0.46710 1.27007
> cf = 6520.535863
> p = 2.08852 0.46710 1.27007
> cf = 6520.162496
> p = 1.97984 0.47045 1.23952
> cf = 6520.162496
> p = 1.97984 0.47045 1.23952
> cf = 6520.137921
> p = 2.03858 0.47565 1.27770
> cf = 6520.066349
> p = 2.05738 0.46850 1.27603
> cf = 6520.066349
> p = 2.05738 0.46850 1.27603
> cf = 6520.056775
> p = 2.00720 0.47184 1.25076
> cf = 6520.056775
> p = 2.00720 0.47184 1.25076
> cf = 6520.034549
> p = 2.01624 0.47252 1.24199
> cf = 6520.031033
> p = 2.01829 0.46960 1.24230
> cf = 6520.026549
> p = 2.03565 0.46991 1.26052
> cf = 6520.022287
> p = 2.01530 0.47126 1.24951
> cf = 6520.022287
> p = 2.01530 0.47126 1.24951
> cf = 6520.021194
> p = 2.02616 0.47148 1.25706
> cf = 6520.019468
> p = 2.02801 0.47064 1.25575
> cf = 6520.019468
> p = 2.02801 0.47064 1.25575
> cf = 6520.018931
> p = 2.03858 0.47073 1.26692
> cf = 6520.018601
> p = 2.02878 0.47091 1.26087
> cf = 6520.018601
> p = 2.02878 0.47091 1.26087
> cf = 6520.017928
> p = 2.03997 0.47072 1.27160
> cf = 6520.017928
> p = 2.03997 0.47072 1.27160
> cf = 6520.017696
> p = 2.03382 0.47057 1.26429
> cf = 6520.017696
> p = 2.03382 0.47057 1.26429
> cf = 6520.017696
> p = 2.03382 0.47057 1.26429
> cf = 6520.017681
> p = 2.04166 0.47036 1.27285
> cf = 6520.017681
> p = 2.04166 0.47036 1.27285
> cf = 6520.017681
> p = 2.04166 0.47036 1.27285
> cf = 6520.017646
> p = 2.03646 0.47050 1.26782
> Fudging parameters
> Parameters start out as 2.03646
> 0.47050
> 1.26782
>
> Parameters end up as 2.03646
> 0.47050
> 3.57041
>
> Estimated hyperparameters: 2.03646
> 0.47050
> 3.57041
>
> Calculating parameter updates
> Making predictions for scans: 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31
> Finished making predictions for scans: 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31
> Iter: 0, scan: 0, gpu_mss = 1.037092
>
> terminate called after throwing an instance of 'NEWMAT::SingularException'
>
> ########################################################################
>
> To unsubscribe from the FSL list, click the following link:
> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1
########################################################################
To unsubscribe from the FSL list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1
|