Hi,
Thanks for checking that.
Are those the same dimensions of the binary mask (nodif_brain_mask.nii.gz) you are providing and is the binary mask a 3D volume as well?
Cheers,
Matteo
> On 10 Jan 2019, at 16:13, Mark Grier <[log in to unmask]> wrote:
>
> Matteo,
>
> The output file contains a 6 MB avg_b0.nii.gz file and a corrupt PDF. The avg_b0 file opens and has dimensions of 211x131x61 voxels.
>
> Mark
>
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