If you installed FSL 6.0, you should have the following binaries in FSL_DIR/bin/:
eddy_combine eddy_correct eddy_cuda eddy_openmp eddy_quad eddy_squad
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> On December 30, 2018 at 2:32 PM Mahshid Fouladivanda <[log in to unmask]> wrote:
>
>
>
> Hello Dear Experts,
>
> My data is (1b0 + 80DWI scanned right to left and 1b0 + 80DWI scanned left
> to right).
> I performed topup on the data and after field distortion estimation, eddy
> was used to correct the images. Unfortunately performing eddy command in
> terminal gave an error, said eddy command not found!!! Surprisingly, eddy
> with GUI worked. But I need to enter additional inputs that is possible in
> command mode. I would appreciated if you help me.
>
> Regards,
> Mahshid
>
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--
Dr. Tim Schäfer
Postdoc Computational Neuroimaging
Department of Child and Adolescent Psychiatry, Psychosomatics and Psychotherapy
University Hospital Frankfurt, Goethe University Frankfurt am Main, Germany
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