Dear all,
I'm new to this mailing list and have not that much experience with SPM.
I tried to preprocess resting-state fmri data from stroke patients. Due to the extended lesions, i want to perform a cost function lesion masking and i used the clinical toolbox. Then i tried to apply the transformations to the coregisterd and realligned resting-state file with spm 12 'normalize: write'
Now i received an error trying to open this normalize functional file in mricron ( to visually check the normalization).
' error: this image file is smaller than described in header.
expected: 592895352 Selected: 2371932'
for the normalization i used spm12 normalize:write with following features:
- deformation field: Y**. nii file generated by clinical toolbox
- images to write: r**.nii (resting state) files
writings options were 'default'
- bouding box 2x3
voxel size [2 2 2]
interpolation: 4th degree B-spline
the structural file that was normalised with the clinical toolbox, did not show this error. Neither the realigned resting-state image.
Do you have any idea where the problem could be and how i can fix this?
thank you very much for your advise
greetings,
Nele De Bruyn
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