Hello,
You can use the --glm_output option to output this glm info directly from randomise.
Kind Regards
Matthew
--------------------------------
Dr Matthew Webster
FMRIB Centre
John Radcliffe Hospital
University of Oxford
> On 26 Nov 2018, at 20:38, Nicole Petersen <[log in to unmask]> wrote:
>
> Hi FSL experts!
>
> I have been tasked with creating effect size maps in Cohen's d out of randomise outputs. I understand that this could be done by using film_gls --noest to produce PE and COPE images, which can then be converted to Cohen's d through fslmaths. I'd like to try converting the t-statistic images produced by randomise directly (since those are the analyses we're reporting on). Do you all have recommendations as to how to compute these maps?
>
>
> Thanks for any help,
> Nicole Petersen
>
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