Dear FSL experts,
I followed the user-guide in FSL to do the preprocessing for our structural MRI data. We ran voxel-base analysis following the guide and everything went well! However, now we want do some analysis outside of FSL but we need to get the gray matter value of each brain subregions, for example all the regions of Harvard–Oxford Cortical and Subcortical Structural Atlases.
I read some paper which they extracted the value of few regions of interest and I was wondering whether there is a way for me to extract all the subregions in FSL.
Any help is appreciated.
All the best,
Xiao
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