Just to extend what Craig said, you can see how it is used in within
Scipion: https://youtu.be/LAwe9DroypI?t=259
It is available through Scipion....but it is actually an Xmipp method:
https://link.springer.com/protocol/10.1007%2F978-1-62703-137-0_11
All the best, Pablo.
Scipion team.
On 01/10/18 20:51, Craig Yoshioka wrote:
> Hi Da,
>
> I’ve had the same thing happen before (2000+ stacks), I just averaged all the data with a little bit of outlier removal.
>
> I believe Scipion also has a more disciplined way to generate normalization images.
>
>
>> On Oct 1, 2018, at 11:36 AM, Da Cui <[log in to unmask]> wrote:
>>
>> Hi all,
>> The gain reference image for one dataset was missing by accident. In order to achieve a more accurate motioncor result, does anyone have idea about how to generate a gain reference image from the dataset (around 3k movies)?
>> Thank you so much for your help!!!
>> ---Da
>>
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