Dear Khursheed,
To download and install Ximdisp, go to
http://www.ccpem.ac.uk/download.php, then download image2010.tar.gz.
Ximdisp is one of the programs in the suite of (older) MRC programs,
written by Jude Short. The description on the web site follows.
MRC Image Processing System - Tony Crowther, Richard Henderson & Jude
Short (Smith)
Installation is described in /image2010/README. First build all the
libraries and executables using a .bld file specific to your system.
Binaries will then be written to /image2010/bin and all have the extension
.exe
Richard
> Hi,
>
> I'm doing my master's from "Indian Institute of Technology Bombay (IIT
> Bombay), India" university in the field of Cryo-EM. Objective of my work
> is to develop robust algorithm for "Particle picking" & "3D tomographic
> reconstruction" in Cryo-EM. We have few hundred micrographs (.mrc
> format) and their particles markings taken from some external Biology LAB.
>
> Problem which we are facing is that, Biology LAB people had marked
> particles on micrograph (.mrc format) done using "*Ximdis*" software.
> They are saying that these micrograph and their particle marking can be
> opened using Ximdis or CCP-EM tool. As we are new to CCP-EM tool, we
> are not able to open these micrographs and their particle marking. Also
> CCP-EM is crashing or sometime gives error, when micrograph of very big
> dimension i.e 7000x7000 is opened. Below are the few questions for
> which we are searching for the answers.
>
> 1. From where we can get XimDis tool? Because we are not able find
> Ximdis. If there is any download site or link then please let us know.
>
> 2. How to open micrograph and their respective marking file (marking is
> done using Ximdis)?
>
> 3. Also, if we just open big micrograph (7000x7000) from "image" section
> (bottom-right menu) of CCP-EM 1.1 then it gives error.
>
>
> Thanks and Regards,
>
> Khursheed Ali,
>
> M.Tech. - Computer Science and Engineering,
>
> Indian Institute of Technology Bombay (IIT Bombay),
>
> Mumbai, India
>
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