Hi Sara,
This error is caused when Applications and systems configuration files conflict. You might have to re-locate some of these files after you run "brew doctor."
First, run "brew doctor" on terminal. Re-locate those configuration files and try opening FSLeyes. If that doesn't work, try uninstalling python from /Applications. Then, uninstall and install Xquartz and Xcode, Install brewed version of python, and re-install FSL. Then run "brew doctor", Re-locate config files (if any are there). Then try opening FSLeyes from a new terminal window.
Ibrahim
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