Hello,
Can you retry the python installation with this modified fslpython script instead of the one in $FSLDIR?e.g.
sudo /path/to/new/fslpython_install.sh -f /usr/local/fsl
?
Kind Regards
Matthew
--------------------------------
Dr Matthew Webster
FMRIB Centre
John Radcliffe Hospital
University of Oxford
> On 4 Apr 2018, at 15:27, SUBSCRIBE FSL Fang <[log in to unmask]> wrote:
>
> Hi Matthew,
>
> This is what is showed:
>
> [fsluser@localhost ~]$ sudo /usr/local/fsl/etc/fslconf/fslpython_install.sh -f /usr/local/fsl/
> Stage 1
> By installing this python distribution you agree to the license terms in
> /usr/local/fsl//fslpython/LICENSE.txt
> 100%
> Stage 2
> 100%
> [fsluser@localhost ~]$ ls -al $FSLDIR
> total 1380
> drwxr-xr-x. 14 root root 4096 Apr 3 15:52 .
> drwxr-xr-x. 14 root root 4096 Apr 3 15:52 ..
> drwxr-xr-x. 3 root root 12288 Apr 4 15:24 bin
> -rwxr-xr-x. 1 root root 1365 Apr 18 2017 build
> -rw-r--r--. 1 root root 1335197 Mar 19 17:40 build.log
> drwxr-xr-x. 34 root root 4096 Mar 19 16:22 config
> drwxr-xr-x. 7 root root 71 Mar 19 17:40 data
> drwxr-xr-x. 72 root root 4096 Mar 19 17:41 doc
> drwxr-xr-x. 8 root root 4096 Apr 3 15:52 etc
> drwxr-xr-x. 11 root root 4096 Mar 19 16:43 extras
> drwxrwxr-x. 66 root root 4096 Mar 19 17:43 include
> drwxrwxr-x. 2 root root 4096 Mar 19 17:41 lib
> -rw-r--r--. 1 root root 55 Sep 5 2012 LICENCE
> drwxr-xr-x. 3 root root 17 Mar 19 17:40 python
> -rw-r--r--. 1 root root 70 Sep 17 2004 README
> drwxrwxr-x. 67 root root 4096 Mar 19 17:40 refdoc
> drwxr-xr-x. 68 root root 4096 Mar 19 17:43 src
> drwxrwxr-x. 3 root root 4096 Mar 19 17:21 tcl
> [fsluser@localhost ~]$ ls -al $FSLDIR/fslpython
> ls: cannot access /usr/local/fsl/fslpython: No such file or directory
> [fsluser@localhost ~]$ ls -al $FSLDIR/fslpython/envs
> ls: cannot access /usr/local/fsl/fslpython/envs: No such file or directory
> [fsluser@localhost ~]$
>
> Best regards,
> Fang
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