Thank you for your help with this!
My .mat and .con files are attached, though I suspect they are unexceptional.
But I am really having difficulty understanding why the same command (identical input, identical .mat/.con, identical parameters except -o <output>) leads to different behavior when it runs outside of the dual_regression script.
If the problem is degenerate input, why would running from the command line make any difference? Yet from the command line, randomise works correctly and performs the full number of perms. (Well, for some of the ICs, it works correctly. I am trying to figure out why, so I can fix the rest of them too.)
|