Hi Erik,
When I run find_the_biggest on the files you provided, I do get the correct segmentation. I did notice that the indices in your segmentation file go up to 25, while you only supplied 17 seeds_to_* files, so it seems that you included additional files in your call to find_the_biggest. One easy way to check this is just to rerun the find_the_biggest command, which will output into the terminal a list of all the files it is considering. Please check if it includes any files, which are still a left over from previous analyses.
Best wishes,
Michiel
> On 6 Feb 2018, at 01:31, SUBSCRIBE FSL Erik <[log in to unmask]> wrote:
>
> Thank you for your help, Michiel. I have uploaded the requested files to the folder.
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