JiscMail Logo
Email discussion lists for the UK Education and Research communities

Help for DLPOLY Archives


DLPOLY Archives

DLPOLY Archives


DLPOLY@JISCMAIL.AC.UK


View:

Message:

[

First

|

Previous

|

Next

|

Last

]

By Topic:

[

First

|

Previous

|

Next

|

Last

]

By Author:

[

First

|

Previous

|

Next

|

Last

]

Font:

Proportional Font

LISTSERV Archives

LISTSERV Archives

DLPOLY Home

DLPOLY Home

DLPOLY  February 2018

DLPOLY February 2018

Options

Subscribe or Unsubscribe

Subscribe or Unsubscribe

Log In

Log In

Get Password

Get Password

Subject:

Re: Long Rane correction in TABLE file

From:

Alin Elena <[log in to unmask]>

Reply-To:

DL_POLY Mailing List <[log in to unmask]>

Date:

Sat, 24 Feb 2018 07:59:23 +0000

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (200 lines)

no. only the corrections the rest needs to be in the FIELD file units.
Alin


Without Questions there are no Answers!
________________________________________
Dr. Alin Marin ELENA MInstP
Daresbury Laboratory, STFC
Sci-Tech, Keckwick Lane
Daresbury, Warrington, Cheshire
UK, WA4 4AD
https://www.scd.stfc.ac.uk/Pages/Alin-Elena.aspx
+44 (0) 1925 60 3080
________________________________________
________________________________________
From: DL_POLY Mailing List <[log in to unmask]> on behalf of Ommair Ishaque <[log in to unmask]>
Sent: 23 February 2018 20:54:05
To: [log in to unmask]
Subject: Re: [DLPOLY] Long Rane correction in TABLE file

Hi Alin,

 One last thing about tabulated potential. As you said earlier I need to put elrc and virlrc in internal units of dlpoly. Do I also have to put my all interactions (U(r) and G(r)) in the same internal units?


Best

Ommair

On Fri, Feb 23, 2018 at 3:08 AM, Alin Elena <[log in to unmask]<mailto:[log in to unmask]>> wrote:
yes, after each pair of atom1 atom2 you add two numbers coresponding to the lrc energy and virial term

Alin


Without Questions there are no Answers!
________________________________________
Dr. Alin Marin ELENA MInstP
Daresbury Laboratory, STFC
Sci-Tech, Keckwick Lane
Daresbury, Warrington, Cheshire
UK, WA4 4AD
https://www.scd.stfc.ac.uk/Pages/Alin-Elena.aspx
+44 (0) 1925 60 3080<tel:%2B44%20%280%29%201925%2060%203080>
________________________________________
________________________________________
From: DL_POLY Mailing List <[log in to unmask]<mailto:[log in to unmask]>> on behalf of Ommair Ishaque <[log in to unmask]<mailto:[log in to unmask]>>
Sent: 23 February 2018 06:31:02
To: [log in to unmask]<mailto:[log in to unmask]>
Subject: Re: [DLPOLY] Long Rane correction in TABLE file

Thanks Alin,
If I have 5 different interactions in table file then do I have to specify long range corrections separately for all interactions one by one in the same file?

On Feb 22, 2018 5:06 PM, "Alin Elena" <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>> wrote:
no idea what do you mean by hand.

as i said before the corrections need to be put in dlpoly internal units. In next version they will be be consistent with the rest of other units mentioned in the field. look in the script i posted earlier to see more details.

Alin


Without Questions there are no Answers!
________________________________________
Dr. Alin Marin ELENA MInstP
Daresbury Laboratory, STFC
Sci-Tech, Keckwick Lane
Daresbury, Warrington, Cheshire
UK, WA4 4AD
https://www.scd.stfc.ac.uk/Pages/Alin-Elena.aspx
+44 (0) 1925 60 3080<tel:%2B44%20%280%29%201925%2060%203080><tel:%2B44%20%280%29%201925%2060%203080>
________________________________________
________________________________________
From: DL_POLY Mailing List <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>> on behalf of Ommair Ishaque <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>>
Sent: 22 February 2018 21:08:39
To: [log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>
Subject: Re: [DLPOLY] Long Rane correction in TABLE file

But I tested it and i dont know why dlpoly it not picking it correctly. When i did it by hand then my result with and without tabulated potential are matching. Is there any particular format for LRC in table?


Best

Ommair

On Thu, Feb 22, 2018 at 4:02 PM, Alin Elena <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>>> wrote:
yes.
Alin


Without Questions there are no Answers!
________________________________________
Dr. Alin Marin ELENA MInstP
Daresbury Laboratory, STFC
Sci-Tech, Keckwick Lane
Daresbury, Warrington, Cheshire
UK, WA4 4AD
https://www.scd.stfc.ac.uk/Pages/Alin-Elena.aspx
+44 (0) 1925 60 3080<tel:%2B44%20%280%29%201925%2060%203080><tel:%2B44%20%280%29%201925%2060%203080><tel:%2B44%20%280%29%201925%2060%203080>
________________________________________
________________________________________
From: DL_POLY Mailing List <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>>> on behalf of Ommair Ishaque <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>>>
Sent: 22 February 2018 20:51:18
To: [log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>>
Subject: Re: [DLPOLY] Long Rane correction in TABLE file

Hi Alin,

I just want or confirm, does dlpoly automatically picks these long range corrections from table file?


Best

Ommair

On Sat, Feb 17, 2018 at 10:01 AM, Alin Elena <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>>>> wrote:
Hi Omair,

there is a section in the manual that deals with it.

you can also use as example this script that tabulates a potential
https://gitlab.com/drFaustroll/dlTables/blob/master/potential.py
it also computes the lrc for both energy and virial. formulae are in the comments.

Regards,
Alin

Without Questions there are no Answers!
________________________________________
Dr. Alin Marin ELENA MInstP
Daresbury Laboratory, STFC
Sci-Tech, Keckwick Lane
Daresbury, Warrington, Cheshire
UK, WA4 4AD
https://www.scd.stfc.ac.uk/Pages/Alin-Elena.aspx
+44 (0) 1925 60 3080<tel:%2B44%20%280%29%201925%2060%203080><tel:%2B44%20%280%29%201925%2060%203080><tel:%2B44%20%280%29%201925%2060%203080><tel:%2B44%20%280%29%201925%2060%203080>
________________________________________
________________________________________
From: DL_POLY Mailing List <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>>>> on behalf of Ommair Ishaque <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>>>>
Sent: 17 February 2018 14:47:08
To: [log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>><mailto:[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]<mailto:[log in to unmask]>>>>
Subject: [DLPOLY] Long Rane correction in TABLE file

Hi,

I mostly use tabulated potential  (TABLE) for my calculations. I am not sure how to include LRC in table file. Is there any format which explains this?

________________________________

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1

########################################################################

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1


________________________________

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1

########################################################################

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1


________________________________

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1

########################################################################

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1

________________________________

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1

########################################################################

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1


________________________________

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1

########################################################################

To unsubscribe from the DLPOLY list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=DLPOLY&A=1

Top of Message | Previous Page | Permalink

JiscMail Tools


RSS Feeds and Sharing


Advanced Options


Archives

January 2024
August 2023
May 2023
April 2023
December 2022
November 2022
October 2022
September 2022
August 2022
July 2022
June 2022
May 2022
April 2022
March 2022
January 2022
November 2021
October 2021
September 2021
August 2021
July 2021
June 2021
May 2021
April 2021
March 2021
February 2021
January 2021
December 2020
November 2020
October 2020
September 2020
August 2020
July 2020
June 2020
May 2020
April 2020
February 2020
January 2020
December 2019
November 2019
October 2019
September 2019
August 2019
July 2019
June 2019
May 2019
April 2019
March 2019
February 2019
January 2019
December 2018
November 2018
October 2018
September 2018
August 2018
July 2018
June 2018
May 2018
April 2018
March 2018
February 2018
January 2018
December 2017
November 2017
October 2017
September 2017
August 2017
July 2017
June 2017
May 2017
April 2017
March 2017
February 2017
January 2017
December 2016
October 2016
September 2016
May 2016
March 2016


JiscMail is a Jisc service.

View our service policies at https://www.jiscmail.ac.uk/policyandsecurity/ and Jisc's privacy policy at https://www.jisc.ac.uk/website/privacy-notice

For help and support help@jisc.ac.uk

Secured by F-Secure Anti-Virus CataList Email List Search Powered by the LISTSERV Email List Manager