Hi Duncan, I added -D, and this is what I got as output (some of the
things are the same as before):
{'d_dir': '/usr/local', 'test_csv': None, 'verbose': True,
'get_source': None, 'checksum_type': 'sha256', 'checksum': None,
'quiet': None, 'env_all': None, 'update': None, 'skipchecksum': None,
'get_feeds': None, 'requestversion': '5.0.10', 'download': None,
'list_versions': None, 'test_installer': None, 'archive': None,
'env_only': None, 'skip_env': None}
--- FSL Installer - Version 3.0.11 ---
[Warning] Some operations of the installer require administative rights,
for example installing into the default folder of /usr/local.
If your account is an 'Administrator' (you have 'sudo' rights)
then you will be prompted for your administrator password
when necessary.
When asked a question, the default answer is given in square brackets.
Hit the Enter key to accept this default answer.
Calculating fastest mirror
Trying https://fsl.fmrib.ox.ac.uk/fsldownloads/
Attempting to open https://fsl.fmrib.ox.ac.uk/fsldownloads/fslmirrorlist.txt
Time out trying https://fsl.fmrib.ox.ac.uk/fsldownloads/fslmirrorlist.txt
[FAILED] https://fsl.fmrib.ox.ac.uk/fsldownloads/
So the new things are the curly brackets at the beginning, which I
guess just list the specifications of the command I typed in, and then
Calculating fastest mirror
Trying https://fsl.fmrib.ox.ac.uk/fsldownloads/
Attempting to open https://fsl.fmrib.ox.ac.uk/fsldownloads/fslmirrorlist.txt
Time out trying https://fsl.fmrib.ox.ac.uk/fsldownloads/fslmirrorlist.txt
The FAILED message at the end is the same.
Thanks in advance for any suggestions!
On 1/23/18, Duncan Mortimer <[log in to unmask]> wrote:
> Please run the installer with the -D option and send me the output.
>
> Regards.
>
> Duncan
>
> On 22 Jan 2018, at 17:49, Darko Komnenić
> <[log in to unmask]<mailto:[log in to unmask]>> wrote:
>
> Hi Mark,
> thanks a lot for the info!
> I downloaded the fslinstaller.py from this link:
> https://fsl.fmrib.ox.ac.uk/fsldownloads/fslinstaller.py
> After CD-ing into the appropriate folder and typing: python
> fslinstaller.py -d /usr/local -V 5.0.10 I first got an instruction
> about entering an administrative password etc. ([Warning] Some
> operations of the installer require administative rights, for
> example...) and then after a few seconds, this message: [FAILED]
> https://fsl.fmrib.ox.ac.uk/fsldownloads/
>
> If you or anyone else have any further suggestions, I'd be very grateful!
> Best,
> Darko
>
>
>
> On 1/21/18, Mark Jenkinson
> <[log in to unmask]<mailto:[log in to unmask]>> wrote:
> Hi,
>
> To install the latest version of FSL try using the python FSL installer
> directly (see the general instructions for Linux installations). I am not
> sure what set of Ubuntu versions this will support, but try it and let us
> know how it goes.
>
> If you use our installer then you can specify a local directory to install
> all of FSL into, and by doing it that way you can have each user using a
> different version of FSL. Just make sure that you update the setup files
> (e.g., ~/.bashrc, ~/.profile, ~/.bash_profile) to set the environment
> correctly (i.e., FSLDIR, PATH, etc). In that way you will make sure that
> the right FSL version is being used. It is also possible for the version
> to
> be reassigned dynamically, by changing these environment variables and
> sourcing the right config file.
>
> I hope this works fine, but contact us if you have any problems.
> All the best,
> Mark
>
> Mark Jenkinson, BSc BE DPhil
> Professor of Neuroimaging
> Wellcome Centre for Integrative Neuroimaging
> FMRIB Centre, Nuffield Department of Clinical Neurosciences
> University of Oxford
> John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK
> +44 (0) 1865 610474
>
> [log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]>
> http://www.fmrib.ox.ac.uk/~mark
>
>
>
>
> On 16 Jan 2018, at 17:24, Darko Komnenić
> <[log in to unmask]<mailto:[log in to unmask]><mailto:[log in to unmask]>>
> wrote:
>
> Dear FSL experts,
> I have a few questions regarding the installation of FSL on Ubuntu.
> 1. My supervisor asked me to update the FSL version to 5.0.10 on two
> computers in our lab - I went to this site
> https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FslInstallation/Linu
> which redirected me to this site
> http://neuro.debian.net/pkgs/fsl-complete.html
> but the latest version I see there is FSL 5.0.7. However, one of the two
> computers in question has FSL 5.0.9, so that version must have been
> available at some point. Could you please tell me where I can download the
> version 5.0.10 from?
>
> 2. One of the two computers has Ubuntu version 10.04.4 LTS, the other 12.04
> LTS. Is that too old, or can I still install FSL there?
>
> 3. Both computers have several user accounts. Is it possible to only update
> the FSL version on one account, while keeping the older version on other
> accounts?
>
> Thank you in advance for the replies!
> Kind regards,
> Darko
>
> --
> Duncan Mortimer
> Senior Informatics Officer,
> Wellcome Centre for Integrative Neuroimaging, FMRIB, University of Oxford
> John Radcliffe Hospital, Oxford, UK
>
>
>
>
>
>
>
>
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