Dear Manuela,
> I have a question about registration. I had to adjust BET, because the fractional intensity threshold of 0.5 extracted some parts of the frontal brain. After adjusting I run registration within the ICA Gui; some registration look fine but with others I am not sure. The summary registration, FMRI to standard space looks like some kind of ghosting. The structural to standard looks fine. Now, I am not sure if I can proceed with this, or how to change it ?
> I attached a picture.
>
> Any recommendation/help would be appreciated.
that doesn’t look like a registration problem to me. Have you checked to see if the strange hypo-intense areas that you see are present already in the original images?
Jesper
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