Dear Robert,
I'm afraid such a functionality does not exist. This would indeed be a
HUGE array.
You could try and hack your way into the code. This would probably be
easiest in the CPU version. But I'm afraid you're on your own there.
HTH,
Sjors
On 01/17/2018 02:17 PM, Buecker, Robert wrote:
> Dear List,
>
> this one goes out mostly to the Relion developers... we are currently (ab)using Relion 2.1 for a specific kind of reconstruction, where we can put the particles into a specific order, to have some prior/sanity check about their orientation (or rather the change between consecutive particles).
>
> In this context, it would be extremely helpful to have access to the _full_ angular posterior distribution ( \Gamma_{i\phi}^{(n)} ) of each particle instead of just the position and height (rlnMaxValueProbDistribution) of its global maximum. This would be a massive chunk of data, but we'd need it only for validation after the final refinement iteration.
>
> So far I could not find an option in relion_refine to access the distribution in an output file - is there some trick to still get it (e.g. using some debug switch in the source code, or killing the process in the right moment and snatching it from temporary files)?
>
> Best regards,
> Robert
>
> --
> dr. robert bücker
> max planck institute for the structure and dynamics of matter
> atomically resolved dynamics department
> desy bldg. 99 (cfel)
> luruper chaussee 149
> 22761 hamburg, germany
> tel. +49 40 8998-6278 / -86043
> mob. +49 157 70210628
>
> [log in to unmask]
> http://www.mpsd.mpg.de/68786/Femtosecond_Diffraction
--
Sjors Scheres
MRC Laboratory of Molecular Biology
Francis Crick Avenue, Cambridge Biomedical Campus
Cambridge CB2 0QH, U.K.
tel: +44 (0)1223 267061
http://www2.mrc-lmb.cam.ac.uk/groups/scheres
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