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ENV-PHYSIOL  November 2017

ENV-PHYSIOL November 2017

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Subject:

Intro to Bayesian hierarchical (mixed) models using R

From:

Oliver Hooker <[log in to unmask]>

Reply-To:

Oliver Hooker <[log in to unmask]>

Date:

Tue, 21 Nov 2017 17:23:31 +0000

Content-Type:

text/plain

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text/plain (175 lines)

Introduction to Bayesian hierarchical modelling using R (IBHM02)

https://www.prstatistics.com/course/introduction-to-bayesian-hierarchical-modelling-using-r-ibhm02/

29th January 2018 - 2nd February 2018

Course Overview:
This course will cover introductory hierarchical modelling for real-world data sets from a Bayesian perspective. These methods lie at the forefront of statistics research and are a vital tool in the scientist’s toolbox. The course focuses on introducing concepts and demonstrating good practice in hierarchical models. All methods are demonstrated with data sets which participants can run themselves. Participants will be taught how to fit hierarchical models using the Bayesian modelling software Jags and Stan through the R software interface. The course covers the full gamut from simple regression models through to full generalised multivariate hierarchical structures. A Bayesian approach is taken throughout, meaning that participants can include all available information in their models and estimates all unknown quantities with uncertainty. Participants are encouraged to bring their own data sets for discussion with the course tutors.

Monday 29th – Classes from 09:00 to 17:00
Module 1: Introduction to Bayesian Statistics
Module 2: Linear and generalised linear models (GLMs)
Practical: Using R, Jags and Stan for fitting GLMs
Round table discussion: Understanding Bayesian models

Tuesday 30th – Classes from 09:00 to 17:00
Module 3: Simple hierarchical regression models
Module 4: Hierarchical models for non-Gaussian data
Practical: Fitting hierarchical models
Round table discussion: Interpreting hierarchical model output

Wednesday 31st – Classes from 09:00 to 17:00
Module 5: Hierarchical models vs mixed effects models
Module 6:  Multivariate and multi-layer hierarchical models
Practical: Advanced examples of hierarchical models
Round table discussion: Issues of continuous vs discrete time

Thursday 1st – Classes from 09:00 to 16:00
Module 7: Shrinkage and variable selection
Module 8: Hierarchical models and partial pooling
Practical: Shrinkage modelling
Round table discussion Bring your own data set

Friday 2nd – Classes from 09:00 to 16:00
Final day for recap session, catch up time and bring your own data set

Please send enquiries to [log in to unmask] or visit www.prstatistics.com

Other up-coming courses


1.	November 20th - 25th 2017
APPLIED BAYESIAN MODELLING FOR ECOLOGISTS AND EPIDEMIOLOGISTS #ABME
SCENE, Scotland, Dr. Matt Denwood
http://www.prstatistics.com/course/applied-bayesian-modelling-ecologists-epidemiologists-abme03/

2.	November 27th – December 1st 2017
INTRODUCTION TO PYTHON FOR BIOLOGISTS #IPYB
Margam Discovery Centre, Wales, Dr. Martin Jones
http://www.prinformatics.com/course/introduction-to-python-for-biologists-ipyb04/
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3.	December 4th - 8th 2017
ADVANCING IN STATISTICAL MODELLING USING R #ADVR
Margam Discovery Centre, Wales, Dr. Luc Bussiere, Dr. Tom Houslay, Dr. Ane Timenes Laugen,
http://www.prstatistics.com/course/advancing-statistical-modelling-using-r-advr07/
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4.	January 29t – February 2nd 2018
INTRODUCTION TO BAYESIAN HIERARCHICAL MODELLING #IBHM
SCENE, Scotland, Dr. Andrew Parnell
http://www.prstatistics.com/course/introduction-to-bayesian-hierarchical-modelling-using-r-ibhm02/

5.	January 29th – February 2nd 2018
PHYLOGENETIC DATA ANALYSIS USING R #PHYL
SCENE, Scotland, Dr. Emmanuel Paradis
https://www.prstatistics.com/course/introduction-to-phylogenetic-analysis-with-r-phyg-phyl02/
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6.	February 19th – 23rd 2018
MOVEMENT ECOLOGY #MOVE
Margam Discovery Centre, Wales, Dr Luca Borger, Dr Ronny Wilson, Dr Jonathan Potts
https://www.prstatistics.com/course/movement-ecology-move01/

7.	February 19th – 23rd 2018
GEOMETRIC MORPHOMETRICS USING R #GMMR
Margam Discovery Centre, Wales, Prof. Dean Adams, Prof. Michael Collyer, Dr. Antigoni Kaliontzopoulou
http://www.prstatistics.com/course/geometric-morphometrics-using-r-gmmr01/
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8.	March 5th - 9th 2018
SPATIAL PRIORITIZATION USING MARXAN #MRXN
Margam Discovery Centre, Wales, Jennifer McGowan   
https://www.prstatistics.com/course/introduction-to-marxan-mrxn01/

9.	March 12th - 16th 2018
ECOLOGICAL NICHE MODELLING USING R #ENMR
Glasgow, Scotland, Dr. Neftali Sillero
http://www.prstatistics.com/course/ecological-niche-modelling-using-r-enmr02/

10.	March 19th – 23rd 2018
BEHAVIOURAL DATA ANALYSIS USING MAXIMUM LIKLIHOOD IN R #BDML
Glasgow, Scotland, Dr William Hoppitt
http://www.psstatistics.com/course/behavioural-data-analysis-using-maximum-likelihood-bdml01/
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11.	April 9th – 13th 2018 
NETWORK ANAYLSIS FOR ECOLOGISTS USING R #NTWA
Glasgow, Scotland, Dr. Marco Scotti   
https://www.prstatistics.com/course/network-analysis-ecologists-ntwa02/

12.	April 16th – 20th 2018
INTRODUCTION TO STATISTICAL MODELLING FOR PSYCHOLOGISTS USING R #IPSY
Glasgow, Scotland, Dr. Dale Barr, Dr Luc Bussierre   
http://www.psstatistics.com/course/introduction-to-statistics-using-r-for-psychologists-ipsy01/

13.	April 23rd – 27th 2018
MULTIVARIATE ANALYSIS OF ECOLOGICAL COMMUNITIES USING THE VEGAN PACKAGE #VGNR
Glasgow, Scotland, Dr. Peter Solymos, Dr. Guillaume Blanchet             
https://www.prstatistics.com/course/multivariate-analysis-of-ecological-communities-in-r-with-the-vegan-package-vgnr01/

14.	April 30th – 4th May 2018
QUANTITATIVE GEOGRAPHIC ECOLOGY: MODELING GENOMES, NICHES, AND COMMUNITIES #QGER
Glasgow, Scotland, Dr. Dan Warren, Dr. Matt Fitzpatrick
https://www.prstatistics.com/course/quantitative-geographic-ecology-using-r-modelling-genomes-niches-and-communities-qger01/
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15.	May 7th – 11th 2018 ADVANCES IN MULTIVARIATE ANALYSIS OF SPATIAL ECOLOGICAL DATA USING R #MVSP
CANADA (QUEBEC), Prof. Pierre Legendre, Dr. Guillaume Blanchet
https://www.prstatistics.com/course/advances-in-spatial-analysis-of-multivariate-ecological-data-theory-and-practice-mvsp03/

16.	May 14th - 18th 2018
INTRODUCTION TO MIXED (HIERARCHICAL) MODELS FOR BIOLOGISTS #IMBR
CANADA (QUEBEC), Prof Subhash Lele 
https://www.prstatistics.com/course/introduction-to-mixed-hierarchical-models-for-biologists-using-r-imbr01/

17.	May 21st - 25th 2018
INTRODUCTION TO PYTHON FOR BIOLOGISTS #IPYB
SCENE, Scotland, Dr. Martin Jones
http://www.prinformatics.com/course/introduction-to-python-for-biologists-ipyb05/

18.	May 21st - 25th 2018
INTRODUCTION TO REMOTE SENISNG AND GIS FOR ECOLOGICAL APPLICATIONS
Glasgow, Scotland, Prof. Duccio Rocchini, Dr. Luca Delucchi
https://www.prinformatics.com/course/introduction-to-remote-sensing-and-gis-for-ecological-applications-irms01/

19.	May 28th – 31st 2018
STABLE ISOTOPE MIXING MODELS USING SIAR, SIBER AND MIXSIAR #SIMM
CANADA (QUEBEC) Dr. Andrew Parnell, Dr. Andrew Jackson 
https://www.prstatistics.com/course/stable-isotope-mixing-models-using-r-simm04/

20.	May 28th – June 1st 2018
ADVANCED PYTHON FOR BIOLOGISTS #APYB
SCENE, Scotland, Dr. Martin Jones
https://www.prinformatics.com/course/advanced-python-biologists-apyb02/
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21.	June 12th -0 15th 2018
SPECIES DISTRIBUTION MODELLING #DBMR
Myuna Bay sport and recreation, Australia, TBC
COMING SOON  www.PRstatistics.com

22.	November 6th – 10th 2017
LANDSCAPE GENETIC DATA ANALYSIS USING R #LNDG
Myuna Bay sport and recreation, Australia, TBC
COMING SOON  www.PRstatistics.com

23.	June 18th – 22nd 2018
STRUCTURAL EQUATION MODELLING FOR ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS USING R #SEMR
Myuna Bay sport and recreation, Australia, TBC
COMING SOON  www.PRstatistics.com
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24.	July 2nd - 5th 2018
SOCIAL NETWORK ANALYSIS FOR BEHAVIOURAL SCIENTISTS USING R #SNAR
Glasgow, Scotland, Prof James Curley
http://www.psstatistics.com/course/social-network-analysis-for-behavioral-scientists-snar01/

25.	July 8th – 12th 2018
MODEL BASE MULTIVARIATE ANALYSIS OF ABUNDANCE DATA USING R #MBMV
Glasgow, Scotland, Prof David Warton
https://www.prstatistics.com/course/model-base-multivariate-analysis-of-abundance-data-using-r-mbmv02/

26.	July 16th – 20th 2018
PRECISION MEDICINE BIOINFORMATICS: FROM RAW GENOME AND TRANSCRIPTOME DATA TO CLINICAL INTERPRETATION #PMBI
Glasgow, Scotland, Dr Malachi Griffith, Dr. Obi Griffith
https://www.prinformatics.com/course/precision-medicine-bioinformatics-from-raw-genome-and-transcriptome-data-to-clinical-interpretation-pmbi01/

27.	July 23rd – 27th 2018
EUKARYOTIC METABARCODING
Glasgow, Scotland, Dr. Owen Wangensteen
http://www.prinformatics.com/course/eukaryotic-metabarcoding-eukb01/

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