Hi,
I am receiving a similar error message when attempting to run a batch script and unable to determine the cause.
Errors as follows:
"child killed: SIGABRT
while executing
"fsl:exec "${FSLDIR}/bin/feat_model design" $fmri(featModelOpts) -N feat0_model -l logs "
(procedure "firstLevelMaster" line 43)
invoked from within
"firstLevelMaster $session"
invoked from within
"if { $done_something == 0 } {
if { ! $fmri(inmelodic) } {
if { $fmri(level) == 1 } {
for { set session 1 } { $session <= $fmri(mult..."
(file "/nas/longleaf/apps/fsl/5.0.10/fsl/bin/feat" line 390)
/bin/cp /proj/dichterlab/BATA/Analysis/MID/Prestats_1stLev/BA0047/BA0047_V1/antic/FEAT_run1.fsf design.fsf
/nas/longleaf/apps/fsl/5.0.10/fsl/bin/feat_model design"
"terminate called after throwing an instance of 'NEWMAT::ProgramException'
FATAL ERROR ENCOUNTERED:
COMMAND:
/nas/longleaf/apps/fsl/5.0.10/fsl/bin/feat_model design
ERROR MESSAGE:
child killed: SIGABRT
END OF ERROR MESSAGE"
When I load the design.fsf file for a given participant, all paths appear correctly and it runs without error from the GUI.
The only thing that I can possibly think of is that in the template.fsf file (attached), I list "Total Number of Volumes" as "NVOL", which in my batch script uses fslnvols to count the number of volumes (because they may slightly vary per person).
In the script it is: NVOL=`fslnvols $FUNCDATA` (when I echo, there are no errors)
Any help is appreciated!
Best,
Erin
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