Hello
Thanks for the reply. No it doesn't work without the -d option. I get an extra error message complaining about ols_dof :
fsl_glm -i filtered_func_data.nii.gz --vxf=confoundEV1,confoundEV2 --out_res=pnmcorr
ols_dof: Error in determining the trace, resorting to basic calculation
Image Exception : #3 :: Mask of different size used in matrix()
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
Aborted (core dumped)
Best wishes
Michael
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