Hi fsl experts,
I am interested in computing a registration using the eddy command and then applying the computed transform separately. Is there a way to do this? In other words, is there a way to output an affine transform for each volume in a diffusion dataset that maps each volume to the first volume input to --imain? The my original idea was to use the eddy_parameters file to do this, is it possible to convert this file into a set of transformations?
thanks so much,
Ben
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