Thank you very much Colin!
The threshold is highest!
I've seen several reports of local max before, but you're right, I guess I'll just report it as is!
Thanks again,
Walid
> On Feb 25, 2017, at 0:22, Colin Hawco <[log in to unmask]> wrote:
>
> Raise your threshold to try to cut it into smaller sub clusters.
>
> Alternately, reporting a bunch of local maxima is of somewhat questionable value. You could just report fully all of the tracts in which the cluster extends, and show a figure with lots of slices and full coverage.
>
> Best of luck,
>
> Colin Hawco, PhD
> Neuranalysis Consulting
> Neuroimaging analysis and consultation
> www.neuranalysis.com
> [log in to unmask]
>
>
>
>
> -----Original Message-----
> From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf Of Walid Yassin
> Sent: February-23-17 8:14 PM
> To: [log in to unmask]
> Subject: Re: [FSL] Cluster lump?
>
> Hello all,
>
> I got this giant cluster from TBSS. One giant cluster all over the brain!
>
> ClusterIndex Voxels MAX MAX X (mm) MAX Y (mm) MAX Z (mm) COG X (mm) COG Y (mm) COG Z (mm)
> 1 75927 1 40 -7 -35 2.58 -21.7 19.1
>
> I would like to report my findings but this one cluster wonft do!
>
> How can i report the MNI coordinates and the cluster size of the sub clusters substituting this giant cluster?
>
> Thank you in advance,
>
> Walid
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