Raise your threshold to try to cut it into smaller sub clusters.
Alternately, reporting a bunch of local maxima is of somewhat questionable value. You could just report fully all of the tracts in which the cluster extends, and show a figure with lots of slices and full coverage.
Best of luck,
Colin Hawco, PhD
Neuranalysis Consulting
Neuroimaging analysis and consultation
www.neuranalysis.com
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-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf Of Walid Yassin
Sent: February-23-17 8:14 PM
To: [log in to unmask]
Subject: Re: [FSL] Cluster lump?
Hello all,
I got this giant cluster from TBSS. One giant cluster all over the brain!
ClusterIndex Voxels MAX MAX X (mm) MAX Y (mm) MAX Z (mm) COG X (mm) COG Y (mm) COG Z (mm)
1 75927 1 40 -7 -35 2.58 -21.7 19.1
I would like to report my findings but this one cluster won’t do!
How can i report the MNI coordinates and the cluster size of the sub clusters substituting this giant cluster?
Thank you in advance,
Walid
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