Hi Jesper,
Thank you for your reply. I just sent you three tar.gz files: Datasets for two subjects (named "subj1_preproc" and "subj2_preproc") and the DTI protocol document used for the second subject. Using eddy on the first subject (subj1) worked perfectly, where the data were acquired in the A to P direction. However, I am having problems using eddy on the second subject (subj2), where the only difference is that the data were acquired in the R to L direction instead.
I greatly appreciate your help on this matter, and will await your response.
Best Regards,
Stefan
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