Dear Armando,
did you try the TRANSFORM command in pdbset? It seems appropricate to generate
the other molecules. You probable need to do it separately for each operator
(except the first one, of course, the identity).
Best,
Tim
On Wednesday 18 January 2017 11:13:21 AM Armando Albert wrote:
> Dear all,
> Does any one know how to generate a complete biomolecule out of the
> BIOMOLECULE record from a pdb file that contains one of the four molecules
> forming a tetramer This is an Crio-EM model.
> Armando
>
>
>
> REMARK 350 BIOMOLECULE: 1
> REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
> REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
> REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
> REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
> REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 332.79999
> REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000
> REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
> REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 332.80000
> REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 332.79999
> REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000
> REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000
> REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 332.79999
> REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000
> REMARK 465
--
--
Paul Scherrer Institut
Dr. Tim Gruene
- persoenlich -
Principal Investigator
Biology and Chemistry
OFLC/102
CH-5232 Villigen PSI
Phone: +41 (0)56 310 5297
GPG Key ID = A46BEE1A
|