Dear Marian,
if you comment out or remove the last four lines in cat_long_main.m that begin with "matlabbatch{5}" the deformations will not be deleted. However, you have to process the data again.
Best,
Christian
On Tue, 20 Dec 2016 21:48:07 +0000, Marian Galovic <[log in to unmask]> wrote:
>Dear Christian et al.,
>
>I have been segmenting and normalising a group of subjects with two scans each to a custom DARTEL template using longitudinal segmentation in CAT12. Each of these subjects also has a binary mask in native space that needs to be transformed into common space.
>
>Is there a way to export the estimated deformations in CAT12, in order to apply these to other images (i.e. to also normalise the binary masks into common space)?
>
>Many thanks!
>Marian
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