*sigh*
Well it just happens that my mistake was related to point 1 from your
email yesterday. I've added the images together as dependencies from the
segmentation step, instead of rc1* and rc2* separately. Thanks for the
swift reply!
Here goes another long run of normalizations...
On 11/23/2016 12:37 PM, John Ashburner wrote:
> I'd suggest trying to figure out why the Template_*.nii files are only
> 3D. This could only have happened if one set of imported images was
> used when they were created. Maybe only rc1*.nii files were used - or
> maybe the alignment was done in a way that aligned rc1* and rc2* to some
> sort of single average (which would be very bad - see my email from
> yesterday).
>
> Best regards,
> -John
>
>
> On 23 November 2016 at 11:03, Paul Glad Mihai <[log in to unmask]
> <mailto:[log in to unmask]>> wrote:
>
> Dear List,
>
> I wanted to register another two T1 images to the existing templates
> created with Run DARTEL (create Templates). I loaded the images as
> mentioned in the manual (p. 471): 2 rc1* and 2 rc2* separately. I also
> added the templates starting at Template_1.nii to *_6.nii. Running the
> job resulted in an error which I traced back to Templates being 3D
> instead of 4D. This means that the created Templates were not
> automatically saved as 4D? Is there an extra option one needs to click?
>
> Is there a workaround for this, as rerunning DARTEL create Template, and
> then normalizing all runs again + estimation will take a really long
> time.
>
> Regards,
> Glad
> --
> Paul Glad Mihai, PhD
>
> Independent Research Group "Neural Mechanisms of Human Communication"
> Max Planck Institute for Human Cognitive and Brain Sciences
> Stephanstraße 1A, 04103 Leipzig, Germany
>
> Phone: +49 (0) 341-9940-2478 <tel:%2B49%20%280%29%20341-9940-2478>
> E-mail: [log in to unmask] <mailto:[log in to unmask]>
>
>
--
Paul Glad Mihai, PhD
Independent Research Group "Neural Mechanisms of Human Communication"
Max Planck Institute for Human Cognitive and Brain Sciences
Stephanstraße 1A, 04103 Leipzig, Germany
Phone: +49 (0) 341-9940-2478
E-mail: [log in to unmask]
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