When we attempt to run mask creation via a batch queue, RELION crashes with a segfault. However, running interactively works perfectly fine. No error message is displayed, and no logging occurs. Is this a known bug of RELION/2.0.1?
Here is the commandline of the job:
`which relion_mask_create` --i Refine3D/pooled_subtracted_consensus/run_class001.mrc --o MaskCreate/job001/mask.mrc --lowpass 20 --angpix 0.826 --ini_threshold 0.004 --extend_inimask 15 --width_soft_edge 15
David Hoover
HPC @ NIH
|