Dear FSL experts,
I am using the following command:
fast -R 0.3 -H 0.3 T1.nii.gz which was included as a default command in the script "fslvbm_2_template "
This command ran smoothly without any troubles for 80 of 83 T1 images. The output of the rest three images was an empty files (black screen in fslview) for gray matter/white matter and CSF parts of T1 segmentation.
Three images have the same orientation of the rest 80 images and it is of a good quality and very well brain extracted.
I tried to ran the script "fslvbm_2_template " on these three images, and FAST also failed again to do the segmentation ( the output is empty files).
Please why this happened, and how can I troubleshoot?
Thanks!
Jon
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