Hi
One thing that's not clear in the online documentation of eddy is which
bvecs file should be used with the corrected DW images: the original
.bvec file or the eddy-rotated one?
The last section of the FAQ suggests that one should rotate the original
bvecs afer running eddy? It says that eddy outputs two files, including
one with rotation parameters which should be used to rotate the bvecs.
However, when I run eddy, I get 8 output files, including one named
?.eddy_rotated_bvecs. Are these the eddy-rotated bvecs?
This is all very confusing
Thanks
Julien
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Julien Besle
Senior Investigator Scientist
MRC Institute of Hearing Research
School of Medicine
The University of Nottingham
University Park
Nottingham NG7 2RD
United Kingdom
tel: +44 (0)115 748 6918
web: www.nottingham.ac.uk/medicine/people/julien.besle
www.nottingham.ac.uk/mrcihr
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