Hi Lawrence,
fslroi dti_orig_with_b0s* dti_orig_without_b0s 2 -1 (with * being the
name of the file you want to edit)
should do the job, go ahead and check in fslview (fslview
dti_orig_without_b0s) and number of volumes with fslinfo (fslinfo
dti_orig_without_b0s)
you should see only your diffusion weighted images when you scroll in
4D, and all 60 of them in the original order.
To check what FSL functions can do just type their name in the command
window.
Best wishes,
Barbara
On 16/06/2016 22:31, SUBSCRIBE FSL Anonymous wrote:
> Dear FSL experts,
> Could you give me some suggestions how to use fslroi to remove B0 map.
> Our DTI sequences has 60 directions and fist 2 are B0.
>
> thanks
> Lawrence
>
>
>
> Emory.
|