Okay, a bit complicated compared to completing a C-terminal amino acid
by just adding the OXT. Wouldn't a similar approach like "Other
Modelling Tools" -> "Add OXT to residue" be possible?
Cheers,
Dirk.
On 17.06.2016 14:45, Paul Emsley wrote:
> On 16/06/16 09:26, Dirk Kostrewa wrote:
>> Dear Paul,
>>
>> is there an easy way in Coot to complete the terminal 5-phosphate of
>> a nucleic acid with the missing OP3 oxygen?
>>
>
> No, but...
>
> My understanding is that "completion" like this (in that you add OP3
> but keep the comp_id the same) is not valid according to wwPDB rules.
> You will need to import a new dictionary of a molecule (comp_id) that
> has the extra OP3 and superpose that, match torsions, delete the
> original nucleic acid and merge the new one.
>
>
> Paul.
>
--
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Dirk Kostrewa
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