hi,
the list is at:
http://www2.mrc-lmb.cam.ac.uk/relion/index.php/Download_%26_install
but for the real submission command you must patch the source e.g.
vi ./src/gui_jobwindow.cpp
go to line 149
and replace for e.g. slurm:
qsub.place(current_y, "Queue submit command:", "sbatch", "Name of the
.... (rest of the line)
or write a qsub shell replacement for your cluster.
cheers,
wolfgang
On 06/13/2016 03:11 PM, Carlos Fernández Rodríguez wrote:
> Hi all.
>
> Is there any way to set the "Queue submit command" as environment
> variable?, just like "RELION_QSUB_TEMPLATE" for the template script.
>
> It would be nice to have a list of all environment variables.
>
> Carlos.
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