Dear FSL experts,
I'd like to run modified NPC using PALM, for a dataset containing VBM, TBSS, and 2 dual regression data. I'd like to correct over both modalities and contrasts. I also want to use TFCE.
In such a case, is the following command correct?
palm -i VBM_data.nii.gz -i TBSS_data.nii.gz -i dualreg_network1 -i dualreg_network2 -m VBM_mask -m TBSS_mask -m network1_mask -m network2_mask -d design.mat -t design.con -n 10000 -npcmethod Fisher -npcmod -npccon -T -corrmod -corrcon -save1-p
Specifically, how can I adjust TFCE parameters for TBSS and VBM/rsfMRI simultaneously? I wonder if adding -tfce2D option is correct, because it may affect also for 3D TFCE, i.e. VBM and dual regression data.
Thanks in advance,
Jun
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