Hi,
Suggestion (maybe for Coot 1.0? I realize it would need some substantial changes so prob not a short-term prospect)... would it be possible, rather than (or in addition to) having the refinement map set on a global level, to instead have another column in the display manager allowing for associating maps with models on an individual basis?
I find that increasingly frequently I am refining multiple conformations of the same protein into different maps (e.g. different 3D classes in cryoEM). It's preferable to do this in the same coot session (because it is often helpful to quickly remind yourself of what the other map/model looks like in the same region), but it requires frequent switching of refinement maps (and frequent forgetting to do so and wondering why refinement is misbehaving) - if these could be set as map/model pairs it would make the process more efficient.
Cheers,
Oliver.
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