Hi Matt,
I have run
>> system('/bin/sh -c "echo $FSLDIR"')
/home/ncnc_MEG/fsl/fsl
ans =
0
I also tried
[Y,fileinfo] = flica_load({'NCNC0501_RD.nii.gz'})
Loading "NCNC0501_RD.nii.gz"...
Error using call_fsl (line 40)
FSL call (/bin/sh -c '. /home/ncnc_MEG//etc/fslconf/fsl.sh;
FSLOUTPUTTYPE=NIFTI_PAIR; export FSLOUTPUTTYPE;
$FSLDIR/bin/fslmaths NCNC0501_RD.nii.gz
/tmp/tpbfe69f9c_d7bf_490a_b9ea_d307cad87657') failed, /bin/sh:
/home/ncnc_MEG//etc/fslconf/fsl.sh: No such file or directory
Error in read_avw (line 24)
[status,output]=call_fsl(command);
Error in flica_load (line 39)
[vol dims scales bpp endian] = read_avw(Yfiles{k});
There seems to be something strange with the doulbe '//' in home/ncnc_MEG//etc ...
This is the latest version of FSL - 5.0.9 I just downloaded and installed it yesterday.
Thank you for the help with this. Dominic
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