Please pardon my possibly basic question (but I guess then the answer
could be obvious): how could I run 2nd level analysis across subjects
if I have copes (already in MNI space at 2mm)?
Specifying cope files (output by nipype pipeline) as "Inputs are
3D cope images from FEAT directories" with a simplistic (mean effect)
design in Feat GUI or feeding generated .fsf to feat cmdline just leads
to a somewhat mis-instructed
"Registration has not been run for all of the FEAT directories that you
have selected for group analysis."
since Feat seems to check reg/examples_func2standard.mat,
example_func2standard.mat, and design.lev files in the cope
directories.
What could be the GUI/.fsf/cmdline invocation to provide *eat with all
necessary information?
Thanks in advance for the clarification
--
Yaroslav O. Halchenko
Center for Open Neuroscience http://centerforopenneuroscience.org
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419
WWW: http://www.linkedin.com/in/yarik
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