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CCP4BB  March 2016

CCP4BB March 2016

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Subject:

Re: Eigers, and local CBF formats

From:

Gerard Bricogne <[log in to unmask]>

Reply-To:

Gerard Bricogne <[log in to unmask]>

Date:

Wed, 9 Mar 2016 16:52:15 +0000

Content-Type:

text/plain

Parts/Attachments:

Parts/Attachments

text/plain (50 lines)

Dear Graeme and Eiger users,

     We have been grasping this nettle since last Summer, and it is a
particularly stinging one. At least, crystallographers who have a need
to process Eiger datasets right now can do this with autoPROC with a
fair chance of success. The remaining problems that are turning up at
the moment have to do not just with incomplete information in locally
produced miniCBF files but with inconsistencies between information of
differing provenance about the same items.

     We know of a number of beamlines and users that make use of the
HDF5 converter now included in autoPROC for the task of generating
miniCBF files. If you install the latest (snapshot) version of
autoPROC by going to

               http://www.globalphasing.com/autoproc/

you will have access not only to the native Eiger/HDF5 support in
autoPROC, but also to the latest version of our converter utility. See

 http://www.globalphasing.com/autoproc/ReleaseNotes/ReleaseNotes-autoPROC_snapshot_20160304.txt
 http://www.globalphasing.com/autoproc/wiki/index.cgi?DataProcessingHdf5

We hope that the resulting CBF files (with full mini-cbf header) would
be fully compatible with other processing packages, viewers or tools -
if they can't read HDF5 datasets directly.

     Please let us know if there are inconsistencies or issues. This
invitation extends to all users of this HDF5 capability in autoPROC.


     With best wishes,
     
Clemens, Claus and Gerard.

--
On Tue, Mar 08, 2016 at 07:57:57PM +0000, Graeme Winter wrote:
> Hello World,
>
> A few times over the last week we at the xia2 helpdesk have been asked about support for Eiger detectors, and particularly local dialects of CBF file which are created on Eiger powered beamlines. Often we are able to get a single image which is helpful but from there it is hard to prove everything is working right.
>
> Please could beamline scientists who have an Eiger and use local software to make this into miniCBF files get in touch, ideally with an example data set, so we can test the support in xia2 and DIALS and make corrections where necessary.
>
> Thanks & best wishes Graeme
> --
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