Thanks Marco and Christian-
I was able to get things to run. I know it had to be something pretty
simple.
Bill
On 1/4/16 2:23 AM, "Marko Wilke" <[log in to unmask]> wrote:
>Hi Bill,
>
>from your images, it looks like you did not install the toolbox
>correctly. Unpack the archive to a folder called vbm8 in the
>spm8/toolbox directory. If you then restart Matlab and spm, you should
>see the respective options showing up.
>
>Cheers,
>Marko
>
>William Donald Hopkins wrote:
>> Hi Christian-
>>
>> Thanks for your reply but I still cannot seem to get this to work and am
>> certain it is some issue with my knowledge of MATLAB. When I goto into
>> MATLAB and type SPM and click the VBM & PET option, I get screen 1 which
>> is attached. When I click on toolbox, I get the image on Screen shot 2
>> which is also attached. I never see any option for VBM8 or anything like
>> that.
>>
>> Alternatively, if I request "batch" then click SPM, then Tools, I get
>>the
>> option shown in Screen shot 3 attached. I don't see any option for "Data
>> presentation". Again, I am sure this is an operator head space error but
>> any assistance would be appreciated.
>>
>> Thanks and Happy New Year, Bill
>>
>>
>>
>>
>>
>> On 12/31/15 8:44 AM, "Christian Gaser" <[log in to unmask]>
>>wrote:
>>
>>> Dear Bill,
>>>
>>> after you call vbm8 via the toolbox button you should find a menu entry
>>> vbm8 in the lower window. Then go through the following menu entries:
>>> VBM8|Data presentation|Threshold and transform spmT maps
>>>
>>> Alternatively you can also call the batch mode via the Batch button.
>>>Then
>>> SPM|VBM8|Tools|Threshold and transform spmT maps
>>>
>>> Best,
>>>
>>> Christian
>>>
>>> On Wed, 30 Dec 2015 08:55:50 +0000, William Donald Hopkins
>>> <[log in to unmask]> wrote:
>>>
>>>> Hello-
>>>>
>>>> I am new to MATLAB and SPM, so please forgive the potential ignorance
>>>>of
>>>> this question. I am trying to perform some VBM analyses using SPM8
>>>> following the methods recently described by Kurth, Gaser and Luders
>>>> (2015), Nature Protocol. It worked well until I got to the results
>>>> section. Specifically, in their Step 11, they recommend using the
>>>> "Threshold and transform spmT-maps" function out of the Data
>>>> Presentation within VBM toolbox. When I click on VBM toolbox, I do
>>>>not
>>>> see this option. I only see the options of Beamforming, DEM, Fieldmap
>>>> and MEEGtools. I have installed the latest version of SPM8 so am not
>>>> sure why this toolbox option is not available.
>>>>
>>>> Any assistance or recommendations would-be greatly appreciated,
>>>>
>>>> Bill Hopkins
>>>>
>>>>
>>>
>>>
>>
>
>--
>____________________________________________________
>PD Dr. med. Marko Wilke
> Facharzt für Kinder- und Jugendmedizin
> Leiter, Experimentelle Pädiatrische Neurobildgebung
> Universitäts-Kinderklinik
> Abt. III (Neuropädiatrie)
>
>Marko Wilke, MD, PhD
> Pediatrician
> Head, Experimental Pediatric Neuroimaging
> University Children's Hospital
> Dept. III (Pediatric Neurology)
>
>Hoppe-Seyler-Str. 1
> D - 72076 Tübingen, Germany
> Tel. +49 7071 29-83416
> Fax +49 7071 29-5473
> [log in to unmask]
>
> http://www.medizin.uni-tuebingen.de/kinder/epn/
>____________________________________________________
>
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